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About This Recipe
This low carb, high protein Baked Spaghetti Squash Casserole is the PERFECT way to enjoy all the comforting, cozy tastes of traditional spaghetti without all the extra calories.
Growing up, I always loved spaghetti night! There was something just so comforting about a big bowl of spaghetti with meat sauce and topped with melty cheese.
I knew when I started cooking healthier meals, I wanted to find a way to recreate this meal that was more macro-friendly and this Spaghetti Squash Casserole is perfect for that!
This dish is super simple to prepare and uses spaghetti squash noodles instead of traditional pasta to bring down the carbs. It also has double the protein of traditional pasta by making a creamy, high protein sauce with marina and cottage cheese! Trust me, it’s delicious!
And the best part about this dish is how great it is for meal prep and reheating throughout the week! Perfect for prepping in advance and enjoying for a quick lunch or easy weeknight dinner.
If you like a bit of heat, check out my Buffalo Chicken Spaghetti Squash Casserole! You may also enjoy my Cheesy Spinach and Artichoke Spaghetti Squash Bake or my Cheeseburger Spaghetti Squash Casserole!
Why You’ll Love This Baked Spaghetti Squash Casserole
- Only 7 simple ingredients! With one being a seasoning. That’s it!
- High volume dish (great if you’re working with lower calories)
- Healthy but indulgent! Truly tastes like comfort food.
- Low in calories and carbs with moderate fat and protein.
- Great for meal prep! Make once and have dinner for the week!
- Spaghetti squash – I used a large spaghetti squash and got 5-6 cups (750g) after cooked. Check out these 3 easy ways to cook spaghetti squash!
- Lean ground beef – I used 96% lean ground beef but feel free to use a different beef or even ground chicken or turkey!
- Cream cheese – I used light cream cheese to keep this dish a little lower in fat. Any cream cheese works, even whipped cream cheese if you wanted.
- Cottage cheese – it’s amazing in this! But yogurt would also work.
- Marinara sauce – I love Rao’s because it is top notch quality marinara!
- Tony’s creole seasoning – this creole seasoning pairs perfect with this recipe but you can sub with whatever seasoning blend you had on hand. Or you can simply use salt, onion powder and garlic powder.
To make dairy-free: use dairy-free cream cheese and sub cottage cheese for extra dairy-free cream cheese or dairy-free Greek yogurt.
- Switch up the protein! Use ground turkey or ground chicken instead of beef.
- Alfredo! Trade the marinara sauce for a yummy alfredo.
- Add extra veggies! Like mushrooms, bell peppers, onions, tomatoes or spinach.
- Make vegetarian! Sub with your fav plant-based meat alternative or veggies.
How To Make
The full printable recipe is below, but let me walk you through the process so you know what to expect when you’re making it!
1. Cook spaghetti squash first if you still need to. Preheat the oven to 400F. Cut spaghetti squash in half lengthwise, then scoop out the seeds from the center of both halves. Place halves of squash flesh side down in a 9×13 pan sprayed with cooking spray. Bake for 30-40 minutes, or until tender. Let cool, then use a fork to pull out strands of the flesh.
2. Cook beef over medium heat. Season with 1/2 Tablespoon of creole seasoning and salt and pepper to taste. Crumble the beef as it cooks until no longer pink, then remove from heat.
3. In a large mixing bowl, add softened cream cheese, cottage cheese, and the remaining 1 Tablespoon of creole seasoning. Using a hand mixer, blend until everything is combined.
4. Add the marinara sauce and stir until it has mixed in thoroughly.
5. Add in the beef and spaghetti squash (make sure you drain the water from them first!) Or you can simply add directly to dish (like above).
6. Top with the marinara and cheese mixture.
7. Sprinkle with cheese and bake for about 30 minutes, or until hot and bubbly.
8. Serve and enjoy!
Helpful Tips
Make sure not to overcook your spaghetti squash (we want it al dente!) and to drain any excess water before mixing it with this recipe. Otherwise the dish will be more watery once you take it out of the oven. It’s better to undercook it than overcook, as the squash will still cook some when it goes in the oven with this casserole.
What is the best way to cook spaghetti squash?
There are several easy ways to cook spaghetti squash. You can bake it in the oven, cook in the microwave or air fry it. I personally love roasting it in the oven the best (if I have time) because I think it brings about the best flavor. But truly any work! I also like to cook and shred my squash the night before if I have time to make this casserole prep even easier.
What to serve with this baked spaghetti squash casserole?
Any vegetable or side salad would be great! Some ideas: Ninja Air Fryer Broccoli, Air Fryer Green Beans, Honey Butter Yeast Rolls, Simple Salad with Goat Cheese and Cranberries, Easy Roasted Cauliflower and Carrots
Why is my baked spaghetti squash casserole watery?
Be sure to not overcook your spaghetti squash as this can cause it to be watery and add too much liquid to the dish. I like to bake my spaghetti squash until it is just barely done (able to shred with a fork) because it will continue to cook in the oven with the dish. This prevents overcooking and the casserole turning out watery.
Did you make this? If you snap a photo, please be sure leave a review, tag me on Instagram or TikTok at @LaurenFitFoodie or hashtag #LaurenFitFoodie so I can see your creations!
Baked Spaghetti Squash Casserole (Low Carb, High Protein)
Ingredients
- 1 lb. 96% lean ground beef
- 5-6 cups shredded spaghetti squash (750g) *DRAINED & loosely packed
- 1.5 Tbsp Tony's Creole seasoning separated, or other seasoning
- 8 oz. light cream cheese softened
- 1/2 cup 2% cottage cheese (117g)
- 24 oz. marinara sauce I love Rao’s
- 3/4 cup shredded whole milk mozzarella cheese (84g)
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Instructions
- Preheat the oven to 350 degrees F. Spray a 9×13" dish with cooking spray and set aside.
- Cook beef over medium heat. Season with 1/2 Tablespoon of creole seasoning and salt and pepper to taste. Crumble the beef as it cooks until no longer pink, then remove from heat.
- In a large mixing bowl, add softened cream cheese, cottage cheese, and the remaining 1 Tablespoon of creole seasoning. Using a hand mixer, blend until everything is combined.
- Add the marinara sauce and stir until it has mixed in thoroughly.
- Then, add in the beef and spaghetti squash (make sure you drain the water from them first!); fold to combine.
- Transfer the spaghetti squash mixture to the baking dish and spread out evenly. Sprinkle with cheese and bake for about 30 minutes, or until hot and bubbly.
Equipment
Notes
To make dairy-free: use dairy-free cream cheese and sub cottage cheese for extra dairy-free cream cheese or dairy-free Greek yogurt. To make vegetarian: omit ground beef or sub with your favorite plant-based alternative or roasted veggies, like eggplant, bell peppers, onions, spinach, etc.
Nutrition Information
Nutrition is hand-calculated and accurate. No autocalulations! However, note that values can vary based on the brands you use and if you substitute ingredients.